v0.1 draft
Getting Started with Fungal Electrophysiology Data Structure
The goal of FEDS is to help researchers organize raw fungal electrophysiology data into a validated, shareable structure using only open, non-proprietary tools.
1. Validate Your Data
Before you do anything else, try the validator.
Drag-and-drop a dataset folder or .zip archive to check whether it conforms to the FEDS specification. If the dataset passes validation, it is already FEDS-compliant—no further action is required.
2. Convert Your Data (If Needed)
If your dataset does not pass validation, map lab-specific CSV or binary formats into FEDS using your own scripts or a lightweight Python template.
- No proprietary software
- No complex dependencies
- Uses standard Python libraries (
json,csv)
Note: This step does not clean, filter, or interpret data. It only maps raw measurements and metadata into the FEDS structure.
Exporting from InfluxDB or similar time-series stores? See the draft recipe InfluxDB → FEDS (also in the repository under docs/).
A public conversion template repository will be linked here once the spec repository is published.
3. Optional Next Steps
These resources are optional and provided for reference.
Questions or feedback? See community and contact information →